STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SATB2DNA-binding protein SATB. (733 aa)    
Predicted Functional Partners:
TBR1
T-box brain transcription factor 1.
   
  
 0.778
FEZF2
FEZ family zinc finger 2.
    
 
 0.696
CUX1
Homeobox protein cut-like.
    
 
 0.662
SOX5
SRY-box transcription factor 5.
      
 0.615
CUX2
Homeobox protein cut-like.
    
 
 0.585
FOXG1
Uncharacterized protein.
    
 
 0.575
PAX6
Paired box 6.
      
 0.552
GAD1
Glutamate decarboxylase 1.
      
 0.508
FOXP2
Forkhead box P2.
    
 
 0.508
ENSSBOP00000017444
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.507
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.