STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YBX1Y-box binding protein 1. (373 aa)    
Predicted Functional Partners:
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 0.722
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.617
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.612
HNRNPA1
Uncharacterized protein.
   
 0.594
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
   
 0.578
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.578
SNRPD3
Sm domain-containing protein.
   
 0.512
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
  
 0.505
CAPRIN1
Cell cycle associated protein 1.
   
 
 0.494
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.488
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.