Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NEDD4L | SMAD2 | ENSSBOP00000038426 | ENSSBOP00000040315 | NEDD4 like E3 ubiquitin protein ligase. | Mothers against decapentaplegic homolog. | 0.877 |
NEDD4L | SMAD3 | ENSSBOP00000038426 | ENSSBOP00000007959 | NEDD4 like E3 ubiquitin protein ligase. | Mothers against decapentaplegic homolog. | 0.970 |
NEDD4L | SMAD5 | ENSSBOP00000038426 | ENSSBOP00000018574 | NEDD4 like E3 ubiquitin protein ligase. | Mothers against decapentaplegic homolog. | 0.543 |
NEDD4L | SMAD7 | ENSSBOP00000038426 | ENSSBOP00000024750 | NEDD4 like E3 ubiquitin protein ligase. | Mothers against decapentaplegic homolog. | 0.967 |
NEDD4L | SMAD9 | ENSSBOP00000038426 | ENSSBOP00000028803 | NEDD4 like E3 ubiquitin protein ligase. | Mothers against decapentaplegic homolog. | 0.474 |
NEDD4L | SMURF2 | ENSSBOP00000038426 | ENSSBOP00000011368 | NEDD4 like E3 ubiquitin protein ligase. | E3 ubiquitin-protein ligase. | 0.938 |
SMAD2 | NEDD4L | ENSSBOP00000040315 | ENSSBOP00000038426 | Mothers against decapentaplegic homolog. | NEDD4 like E3 ubiquitin protein ligase. | 0.877 |
SMAD2 | SMAD3 | ENSSBOP00000040315 | ENSSBOP00000007959 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.997 |
SMAD2 | SMAD5 | ENSSBOP00000040315 | ENSSBOP00000018574 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.584 |
SMAD2 | SMAD7 | ENSSBOP00000040315 | ENSSBOP00000024750 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.959 |
SMAD2 | SMAD9 | ENSSBOP00000040315 | ENSSBOP00000028803 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.669 |
SMAD2 | SMURF1 | ENSSBOP00000040315 | ENSSBOP00000019885 | Mothers against decapentaplegic homolog. | E3 ubiquitin-protein ligase. | 0.840 |
SMAD2 | SMURF2 | ENSSBOP00000040315 | ENSSBOP00000011368 | Mothers against decapentaplegic homolog. | E3 ubiquitin-protein ligase. | 0.964 |
SMAD2 | TGFBR1 | ENSSBOP00000040315 | ENSSBOP00000004697 | Mothers against decapentaplegic homolog. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.988 |
SMAD2 | TGFBR2 | ENSSBOP00000040315 | ENSSBOP00000034745 | Mothers against decapentaplegic homolog. | TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] | 0.980 |
SMAD2 | YAP1 | ENSSBOP00000040315 | ENSSBOP00000022186 | Mothers against decapentaplegic homolog. | Yes associated protein 1. | 0.962 |
SMAD3 | NEDD4L | ENSSBOP00000007959 | ENSSBOP00000038426 | Mothers against decapentaplegic homolog. | NEDD4 like E3 ubiquitin protein ligase. | 0.970 |
SMAD3 | SMAD2 | ENSSBOP00000007959 | ENSSBOP00000040315 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.997 |
SMAD3 | SMAD5 | ENSSBOP00000007959 | ENSSBOP00000018574 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.594 |
SMAD3 | SMAD7 | ENSSBOP00000007959 | ENSSBOP00000024750 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.957 |
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