STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFTPDSurfactant protein D. (375 aa)    
Predicted Functional Partners:
SFTPC
Surfactant protein C.
   
 
 0.906
ENSSBOP00000035939
C-type lectin domain-containing protein.
  
0.890
SFTPB
Surfactant protein B.
   
 
 0.786
ENSSBOP00000034892
Uncharacterized protein.
   
 0.724
SCGB1A1
Secretoglobin family 1A member 1.
   
  
 0.640
MASP2
Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family.
   
 0.624
AGER
Advanced glycosylation end-product specific receptor.
   
 
 0.612
SIRPB1
Uncharacterized protein.
    
 0.596
SSC5D
Scavenger receptor cysteine rich family member with 5 domains.
   
 0.573
CFI
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.570
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.