STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFAP4Transcription factor AP-4. (308 aa)    
Predicted Functional Partners:
TAF6L
TATA-box binding protein associated factor 6 like.
      
 0.592
UBTF
Upstream binding transcription factor.
    
 
 0.521
RBM14
RNA binding motif protein 14.
      
 0.514
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
      
 0.513
CXXC1
CXXC finger protein 1.
      
 0.512
GMNN
Geminin DNA replication inhibitor.
    
 
 0.503
TSC22D3
TSC22 domain family member 3.
      
 0.448
TAF6
TATA-box binding protein associated factor 6.
      
 0.444
BPTF
Bromodomain PHD finger transcription factor.
    
   0.440
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.