Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSBOP00000010874 | VIPAS39 | ENSSBOP00000010874 | ENSSBOP00000025530 | FIP-RBD domain-containing protein. | VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. | 0.460 |
ENSSBOP00000025295 | ENSSBOP00000030813 | ENSSBOP00000025295 | ENSSBOP00000030813 | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | Uncharacterized protein. | 0.975 |
ENSSBOP00000025295 | VIPAS39 | ENSSBOP00000025295 | ENSSBOP00000025530 | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. | 0.888 |
ENSSBOP00000025295 | VPS11 | ENSSBOP00000025295 | ENSSBOP00000037618 | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. | 0.978 |
ENSSBOP00000025295 | VPS16 | ENSSBOP00000025295 | ENSSBOP00000002695 | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. | 0.983 |
ENSSBOP00000025295 | VPS18 | ENSSBOP00000025295 | ENSSBOP00000030040 | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | VPS18 core subunit of CORVET and HOPS complexes. | 0.983 |
ENSSBOP00000025295 | VPS33B | ENSSBOP00000025295 | ENSSBOP00000003140 | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | 0.697 |
ENSSBOP00000025295 | VPS39 | ENSSBOP00000025295 | ENSSBOP00000039558 | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | VPS39 subunit of HOPS complex. | 0.989 |
ENSSBOP00000025295 | VPS45 | ENSSBOP00000025295 | ENSSBOP00000026170 | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family. | 0.711 |
ENSSBOP00000030813 | ENSSBOP00000025295 | ENSSBOP00000030813 | ENSSBOP00000025295 | Uncharacterized protein. | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | 0.975 |
ENSSBOP00000030813 | VIPAS39 | ENSSBOP00000030813 | ENSSBOP00000025530 | Uncharacterized protein. | VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. | 0.595 |
ENSSBOP00000030813 | VPS11 | ENSSBOP00000030813 | ENSSBOP00000037618 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. | 0.964 |
ENSSBOP00000030813 | VPS18 | ENSSBOP00000030813 | ENSSBOP00000030040 | Uncharacterized protein. | VPS18 core subunit of CORVET and HOPS complexes. | 0.973 |
ENSSBOP00000030813 | VPS33B | ENSSBOP00000030813 | ENSSBOP00000003140 | Uncharacterized protein. | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | 0.911 |
ENSSBOP00000030813 | VPS39 | ENSSBOP00000030813 | ENSSBOP00000039558 | Uncharacterized protein. | VPS39 subunit of HOPS complex. | 0.962 |
ENSSBOP00000030813 | VPS45 | ENSSBOP00000030813 | ENSSBOP00000026170 | Uncharacterized protein. | Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family. | 0.697 |
PRDM4 | VIPAS39 | ENSSBOP00000000130 | ENSSBOP00000025530 | PR domain zinc finger protein 4; May function as a transcription factor involved in cell differentiation. | VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. | 0.540 |
VIPAS39 | ENSSBOP00000010874 | ENSSBOP00000025530 | ENSSBOP00000010874 | VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. | FIP-RBD domain-containing protein. | 0.460 |
VIPAS39 | ENSSBOP00000025295 | ENSSBOP00000025530 | ENSSBOP00000025295 | VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. | Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. | 0.888 |
VIPAS39 | ENSSBOP00000030813 | ENSSBOP00000025530 | ENSSBOP00000030813 | VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. | Uncharacterized protein. | 0.595 |
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