STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPIDRScaffold protein involved in DNA repair. (947 aa)    
Predicted Functional Partners:
FNTA
Farnesyltransferase, CAAX box, alpha.
      
 0.732
HGSNAT
Heparan-alpha-glucosaminide N-acetyltransferase.
      
 0.732
WRN
WRN RecQ like helicase.
    
 0.703
POMK
Protein O-mannose kinase.
      
 0.693
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.682
RPA3
Replication protein A3.
      
 0.650
HOOK3
Hook microtubule tethering protein 3.
    
 
 0.643
ZNF479
Zinc finger protein 479.
      
 0.618
PTPN3
Tyrosine-protein phosphatase non-receptor type; May act at junctions between the membrane and the cytoskeleton.
      
 0.618
DCLRE1C
DNA cross-link repair 1C.
      
 0.617
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.