STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTX3Pentraxin 3. (381 aa)    
Predicted Functional Partners:
TNFAIP6
TNF alpha induced protein 6.
   
 
 0.773
FGF2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.758
HAS2
Hyaluronan synthase 2.
   
  
 0.641
ENSSBOP00000010878
Uncharacterized protein.
    
 
 0.605
FCN2
Ficolin 2.
    
 
 0.589
MBL2
Mannose binding lectin 2.
   
 
 0.584
SELP
Selectin P.
   
 
 0.580
ENSSBOP00000028386
C-type lectin domain-containing protein.
   
 
 0.567
FGF13
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.558
CFHR5
Complement factor H related 5.
   
 
 0.547
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.