STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX19ADEAD-box helicase 19A. (478 aa)    
Predicted Functional Partners:
NUP214
Nucleoporin 214.
    
 
 0.911
GLE1
GLE1 RNA export mediator.
    
 
 0.844
MIF4GD
MIF4G domain containing.
    
   0.597
DHX33
DEAH-box helicase 33.
   
  
 0.591
CTIF
Cap binding complex dependent translation initiation factor.
    
 
 0.579
NUP88
Nucleoporin 88.
   
 
 0.539
XPO1
Exportin 1.
    
 
 0.499
NXF3
Nuclear RNA export factor 3.
    
 
 0.443
NXF1
Nuclear RNA export factor 1.
    
 
 0.443
ENSSBOP00000007996
NTF2 domain-containing protein.
    
 
 0.443
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.