Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASP1 | NLRP10 | ENSSBOP00000009855 | ENSSBOP00000032399 | Uncharacterized protein; Belongs to the peptidase C14A family. | NLR family pyrin domain containing 10. | 0.434 |
CASP1 | PYCARD | ENSSBOP00000009855 | ENSSBOP00000024769 | Uncharacterized protein; Belongs to the peptidase C14A family. | PYD and CARD domain containing. | 0.996 |
CASP1 | RIPK2 | ENSSBOP00000009855 | ENSSBOP00000010286 | Uncharacterized protein; Belongs to the peptidase C14A family. | Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. | 0.517 |
CASP1 | TXNIP | ENSSBOP00000009855 | ENSSBOP00000017612 | Uncharacterized protein; Belongs to the peptidase C14A family. | Thioredoxin interacting protein. | 0.456 |
NLRP10 | CASP1 | ENSSBOP00000032399 | ENSSBOP00000009855 | NLR family pyrin domain containing 10. | Uncharacterized protein; Belongs to the peptidase C14A family. | 0.434 |
NLRP10 | PYCARD | ENSSBOP00000032399 | ENSSBOP00000024769 | NLR family pyrin domain containing 10. | PYD and CARD domain containing. | 0.544 |
NLRP10 | RIPK2 | ENSSBOP00000032399 | ENSSBOP00000010286 | NLR family pyrin domain containing 10. | Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. | 0.488 |
NLRP10 | TXNIP | ENSSBOP00000032399 | ENSSBOP00000017612 | NLR family pyrin domain containing 10. | Thioredoxin interacting protein. | 0.421 |
PYCARD | CASP1 | ENSSBOP00000024769 | ENSSBOP00000009855 | PYD and CARD domain containing. | Uncharacterized protein; Belongs to the peptidase C14A family. | 0.996 |
PYCARD | NLRP10 | ENSSBOP00000024769 | ENSSBOP00000032399 | PYD and CARD domain containing. | NLR family pyrin domain containing 10. | 0.544 |
PYCARD | RIPK2 | ENSSBOP00000024769 | ENSSBOP00000010286 | PYD and CARD domain containing. | Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. | 0.406 |
RIPK2 | CASP1 | ENSSBOP00000010286 | ENSSBOP00000009855 | Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. | Uncharacterized protein; Belongs to the peptidase C14A family. | 0.517 |
RIPK2 | NLRP10 | ENSSBOP00000010286 | ENSSBOP00000032399 | Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. | NLR family pyrin domain containing 10. | 0.488 |
RIPK2 | PYCARD | ENSSBOP00000010286 | ENSSBOP00000024769 | Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. | PYD and CARD domain containing. | 0.406 |
TXNIP | CASP1 | ENSSBOP00000017612 | ENSSBOP00000009855 | Thioredoxin interacting protein. | Uncharacterized protein; Belongs to the peptidase C14A family. | 0.456 |
TXNIP | NLRP10 | ENSSBOP00000017612 | ENSSBOP00000032399 | Thioredoxin interacting protein. | NLR family pyrin domain containing 10. | 0.421 |