STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTF2Replication termination factor 2. (336 aa)    
Predicted Functional Partners:
PKDREJ
Polycystin family receptor for egg jelly.
   
  
 0.485
TULP2
TUB like protein 2; Belongs to the TUB family.
   
  
 0.484
CCDC130
Coiled-coil domain containing 130.
      
 0.472
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
  
 0.467
ZFAND4
Zinc finger AN1-type containing 4.
   
  
 0.466
EEF1A2
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
      
 0.454
MAGEB16
MAGE family member B16.
      
 0.451
CATSPER1
Cation channel sperm associated 1.
      
 0.442
ENSSBOP00000002961
Tr-type G domain-containing protein.
      
 0.441
ENSSBOP00000030240
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
      
 0.441
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.