STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (730 aa)    
Predicted Functional Partners:
ZNF207
Zinc finger protein 207.
   
   0.885
TNPO1
Transportin 1.
   
 
 0.792
SNRPD3
Sm domain-containing protein.
   
 0.786
ENSSBOP00000028983
C2H2-type domain-containing protein.
   
   0.778
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.758
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.755
HNRNPF
Heterogeneous nuclear ribonucleoprotein F.
   
 0.744
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.729
ENSSBOP00000001116
ROKNT domain-containing protein.
   
 0.727
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.727
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.