STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROX1Prospero homeobox 1. (737 aa)    
Predicted Functional Partners:
LYVE1
Lymphatic vessel endothelial hyaluronan receptor 1.
      
 0.616
HNF1B
HNF1 homeobox B.
    
 
 0.603
ENSSBOP00000023654
Uncharacterized protein.
      
 0.535
BARX2
BARX homeobox 2.
      
 0.495
XPO7
Exportin 7.
      
 0.495
VEGFD
Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family.
      
 0.480
IPO4
Importin 4.
      
 0.422
EP300
E1A binding protein p300.
    
 
 0.419
FOXN4
Forkhead box N4.
      
 0.408
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.