Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANKLE2 | BANF1 | ENSSBOP00000017368 | ENSSBOP00000033902 | Ankyrin repeat and LEM domain containing 2. | Barrier to autointegration factor 1. | 0.772 |
ANKLE2 | EMD | ENSSBOP00000017368 | ENSSBOP00000021991 | Ankyrin repeat and LEM domain containing 2. | Emerin. | 0.580 |
ANKLE2 | LEMD3 | ENSSBOP00000017368 | ENSSBOP00000038111 | Ankyrin repeat and LEM domain containing 2. | LEM domain containing 3. | 0.429 |
ANKLE2 | LMNA | ENSSBOP00000017368 | ENSSBOP00000002974 | Ankyrin repeat and LEM domain containing 2. | Lamin A/C; Belongs to the intermediate filament family. | 0.487 |
ANKLE2 | LMNB1 | ENSSBOP00000017368 | ENSSBOP00000019728 | Ankyrin repeat and LEM domain containing 2. | Lamin B1; Belongs to the intermediate filament family. | 0.416 |
ANKLE2 | LMNB2 | ENSSBOP00000017368 | ENSSBOP00000000804 | Ankyrin repeat and LEM domain containing 2. | Lamin B2; Belongs to the intermediate filament family. | 0.416 |
ANKLE2 | PPP2R2A | ENSSBOP00000017368 | ENSSBOP00000010514 | Ankyrin repeat and LEM domain containing 2. | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. | 0.673 |
ANKLE2 | PPP2R2B | ENSSBOP00000017368 | ENSSBOP00000025582 | Ankyrin repeat and LEM domain containing 2. | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. | 0.673 |
ANKLE2 | VRK2 | ENSSBOP00000017368 | ENSSBOP00000009434 | Ankyrin repeat and LEM domain containing 2. | VRK serine/threonine kinase 2. | 0.809 |
BANF1 | ANKLE2 | ENSSBOP00000033902 | ENSSBOP00000017368 | Barrier to autointegration factor 1. | Ankyrin repeat and LEM domain containing 2. | 0.772 |
BANF1 | EMD | ENSSBOP00000033902 | ENSSBOP00000021991 | Barrier to autointegration factor 1. | Emerin. | 0.963 |
BANF1 | LEMD3 | ENSSBOP00000033902 | ENSSBOP00000038111 | Barrier to autointegration factor 1. | LEM domain containing 3. | 0.741 |
BANF1 | LMNA | ENSSBOP00000033902 | ENSSBOP00000002974 | Barrier to autointegration factor 1. | Lamin A/C; Belongs to the intermediate filament family. | 0.909 |
BANF1 | LMNB1 | ENSSBOP00000033902 | ENSSBOP00000019728 | Barrier to autointegration factor 1. | Lamin B1; Belongs to the intermediate filament family. | 0.741 |
BANF1 | LMNB2 | ENSSBOP00000033902 | ENSSBOP00000000804 | Barrier to autointegration factor 1. | Lamin B2; Belongs to the intermediate filament family. | 0.741 |
BANF1 | LMNTD1 | ENSSBOP00000033902 | ENSSBOP00000020664 | Barrier to autointegration factor 1. | Lamin tail domain containing 1. | 0.682 |
BANF1 | PPP2R2A | ENSSBOP00000033902 | ENSSBOP00000010514 | Barrier to autointegration factor 1. | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. | 0.612 |
BANF1 | PPP2R2B | ENSSBOP00000033902 | ENSSBOP00000025582 | Barrier to autointegration factor 1. | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. | 0.612 |
BANF1 | VRK2 | ENSSBOP00000033902 | ENSSBOP00000009434 | Barrier to autointegration factor 1. | VRK serine/threonine kinase 2. | 0.596 |
EMD | ANKLE2 | ENSSBOP00000021991 | ENSSBOP00000017368 | Emerin. | Ankyrin repeat and LEM domain containing 2. | 0.580 |
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