STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM8Lysine demethylase 8. (443 aa)    
Predicted Functional Partners:
RCCD1
RCC1 domain containing 1.
    
 
 0.752
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
      
 0.557
JMJD6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
      
 0.553
JMJD4
Jumonji domain containing 4.
      
 0.522
ENSSBOP00000002019
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.489
ENSSBOP00000002919
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.489
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.489
ENSSBOP00000024474
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.489
ENSSBOP00000031132
Uncharacterized protein.
    
   0.489
RIOX1
Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.
      
 0.485
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.