STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF6PHD finger protein 6. (364 aa)    
Predicted Functional Partners:
HSPA4L
Heat shock protein family A (Hsp70) member 4 like.
    
 0.707
DNAJB4
DnaJ heat shock protein family (Hsp40) member B4.
    
 
 0.699
FAM126B
Family with sequence similarity 126 member B.
      
 0.696
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.688
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.675
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.602
EED
Embryonic ectoderm development.
   
 0.576
VPS13C
Vacuolar protein sorting 13 homolog C.
      
 0.574
ENSSBOP00000001749
CAF1C_H4-bd domain-containing protein.
   
 0.565
ENSSBOP00000004204
WD_REPEATS_REGION domain-containing protein.
   
 0.565
Your Current Organism:
Saimiri boliviensis
NCBI taxonomy Id: 39432
Other names: Bolivian squirrel monkey, S. boliviensis boliviensis, Saimiri boliviensis boliviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.