STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccel_0103KEGG: aoe:Clos_2508 hypothetical protein. (414 aa)    
Predicted Functional Partners:
Ccel_0105
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
    0.717
Ccel_2044
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
   
   0.665
Ccel_0106
PFAM: flagellar protein FliS; KEGG: cth:Cthe_2217 flagellar protein FliS.
  
  
 0.635
Ccel_0102
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 0.600
Ccel_1655
PFAM: cellulosome protein dockerin type I; KEGG: sus:Acid_0258 hypothetical protein.
  
     0.578
Ccel_0104
PFAM: flagellar protein FlaG protein; KEGG: cth:Cthe_2219 flagellar protein FlaG protein.
       0.564
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
   0.499
Ccel_0145
PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_1918 extracellular solute-binding protein.
  
     0.498
Ccel_3150
KEGG: efa:EF2316 hypothetical protein.
  
     0.449
Ccel_1210
KEGG: mac:MA1194 hypothetical protein.
  
     0.445
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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