Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_0144PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpu:BPUM_2666 ABC transporter ATP-binding protein. (290 aa)    
Predicted Functional Partners:
Ccel_0143
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_1916 binding-protein-dependent transport systems inner membrane component.
 
 
 0.986
Ccel_0151
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_3209 binding-protein-dependent transport systems inner membrane component.
 
 
 0.955
Ccel_0946
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_3242 binding-protein-dependent transport systems inner membrane component.
 
 
 0.955
Ccel_1014
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_0393 binding-protein-dependent transport systems inner membrane component.
 
 
 0.955
Ccel_1253
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0727 polysaccharide ABC transporter permease.
 
 
 0.955
Ccel_2456
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_1547 binding-protein-dependent transport systems inner membrane component.
 
 
 0.954
Ccel_2909
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: cth:Cthe_1862 ABC transporter related protein.
 
 
 0.891
Ccel_2111
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3214 sugar ABC transporter permease.
 
 
 0.876
Ccel_0145
PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_1918 extracellular solute-binding protein.
 
   0.874
Ccel_0999
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2515 binding-protein-dependent transport systems inner membrane component.
 
 
 0.873
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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