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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_0152PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_3208 binding-protein-dependent transport systems inner membrane component. (304 aa)    
Predicted Functional Partners:
Ccel_0151
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_3209 binding-protein-dependent transport systems inner membrane component.
 
 
 0.994
Ccel_0150
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH2111 hypothetical protein.
 
  0.991
Ccel_0143
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_1916 binding-protein-dependent transport systems inner membrane component.
 
 
 0.955
Ccel_0946
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_3242 binding-protein-dependent transport systems inner membrane component.
 
 
 0.955
Ccel_1014
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_0393 binding-protein-dependent transport systems inner membrane component.
 
 
 0.955
Ccel_1253
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0727 polysaccharide ABC transporter permease.
 
 
 0.955
Ccel_2456
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_1547 binding-protein-dependent transport systems inner membrane component.
 
 
 0.955
Ccel_2996
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llc:LACR_1477 ABC-type sugar transport system, permease component.
 
 
 0.859
Ccel_2111
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3214 sugar ABC transporter permease.
 
 
 0.840
Ccel_1016
PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_2193 extracellular solute-binding protein.
 
   0.839
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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