Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_0201PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0775 sugar ABC transporter permease. (294 aa)    
Predicted Functional Partners:
Ccel_0202
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3682 sugar ABC transporter (permease).
 
 0.994
Ccel_2909
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: cth:Cthe_1862 ABC transporter related protein.
 
 0.991
Ccel_1135
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_4678 binding-protein-dependent transport systems inner membrane component.
 
 0.975
Ccel_1000
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_0623 binding-protein-dependent transport systems inner membrane component.
 
 0.974
Ccel_1027
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_4678 binding-protein-dependent transport systems inner membrane component.
 
 0.974
Ccel_2995
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO6229 sugar transport system permease protein.
 
 0.974
Ccel_0200
PFAM: extracellular solute-binding protein family 1; KEGG: cbe:Cbei_4964 extracellular solute-binding protein, family 1.
 
 
 0.918
Ccel_2110
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1101 binding-protein-dependent transport systems inner membrane component.
 
 
 0.882
Ccel_3244
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0776 sugar ABC transporter permease.
 
 
 0.880
Ccel_0947
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein.
 
 
 0.879
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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