Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_0296PFAM: ABC-2 type transporter; KEGG: cth:Cthe_2707 ABC-type transport system involved in multi-copper enzyme maturation, permease component. (234 aa)    
Predicted Functional Partners:
Ccel_0297
KEGG: cth:Cthe_2708 hypothetical protein.
  
 0.970
Ccel_0295
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_2706 ABC transporter related protein.
 
 
 0.968
Ccel_0298
KEGG: cth:Cthe_2709 hypothetical protein.
 
     0.950
Ccel_0299
KEGG: cth:Cthe_2710 hypothetical protein.
       0.579
Ccel_1180
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1191 ABC transporter, ATP-binding protein.
 
 
 0.527
Ccel_1917
KEGG: cdf:CD1619 putative ABC transporter, peremase protein.
 
 
 0.464
Ccel_0966
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfu:PF1011 daunorubicin resistance ATP-binding protein DrrA.
  
 
 0.436
Ccel_2159
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afl:Aflv_1573 ABC-type multidrug transport system, ATPase component.
  
 
 0.436
Ccel_2605
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_1324 ABC transporter related.
  
 
 0.436
Ccel_3262
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cdf:CD1604 ABC transporter, ATP-binding protein.
  
 
 0.436
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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