STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccel_0739PFAM: cellulosome protein dockerin type I; FG-GAP repeat protein; KEGG: bld:BLi01376 YesW. (676 aa)    
Predicted Functional Partners:
Ccel_1229
Carbohydrate binding family 6; PFAM: cellulosome protein dockerin type I; Carbohydrate binding family 6; glycoside hydrolase family 43; SMART: cellulose binding type IV; KEGG: cth:Cthe_1271 carbohydrate-binding family 6 protein; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.810
celCCF
Glycoside hydrolase family 48; Probable endoglucanase involved in the degradation of cellulose or related beta-glucans; Belongs to the glycosyl hydrolase 48 (cellulase L) family.
 
 
0.808
Ccel_2530
PFAM: Ricin B lectin; cellulosome protein dockerin type I; KEGG: scl:sce5172 putative secreted protein.
     0.715
Ccel_0740
PFAM: glycoside hydrolase family 5; cellulosome protein dockerin type I; KEGG: cth:Cthe_2872 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
0.714
Ccel_0737
PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; KEGG: cth:Cthe_0274 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
 
  
0.687
Ccel_1972
PFAM: glycoside hydrolase family 43; KEGG: cth:Cthe_0661 ricin B lectin; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.677
Ccel_1257
PFAM: glycoside hydrolase family 43; KEGG: fjo:Fjoh_3875 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.664
Ccel_0755
PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: cth:Cthe_0825 glycoside hydrolase family protein.
  
     0.646
Ccel_1866
PFAM: glycoside hydrolase family 11; KEGG: cpy:Cphy_2105 endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
   
 0.602
Ccel_0379
Protein of unknown function DUF291; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 5; cellulosome protein dockerin type I; protein of unknown function DUF291; KEGG: cth:Cthe_0821 coagulation factor 5/8 type-like protein.
  
   
 0.600
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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