STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccel_0740PFAM: glycoside hydrolase family 5; cellulosome protein dockerin type I; KEGG: cth:Cthe_2872 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (534 aa)    
Predicted Functional Partners:
cel9P
PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; KEGG: cth:Cthe_0433 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
  
   0.855
Ccel_2621
PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: cth:Cthe_0624 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
  
  
 0.802
Ccel_0379
Protein of unknown function DUF291; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 5; cellulosome protein dockerin type I; protein of unknown function DUF291; KEGG: cth:Cthe_0821 coagulation factor 5/8 type-like protein.
   
 0.770
man26A
PFAM: glycoside hydrolase family 26; cellulosome protein dockerin type I; KEGG: cth:Cthe_2811 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 26 family.
 
   
 0.763
celCCF
Glycoside hydrolase family 48; Probable endoglucanase involved in the degradation of cellulose or related beta-glucans; Belongs to the glycosyl hydrolase 48 (cellulase L) family.
 
  
0.751
Ccel_0737
PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; KEGG: cth:Cthe_0274 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
 
  
0.746
Ccel_2109
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: cth:Cthe_0275 cellobiose phosphorylase.
  
  
 0.732
Ccel_0739
PFAM: cellulosome protein dockerin type I; FG-GAP repeat protein; KEGG: bld:BLi01376 YesW.
 
  
0.714
Ccel_0374
TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; KEGG: amr:AM1_2790 beta-glucosidase.
    
 0.713
Ccel_0429
PFAM: PKD domain containing protein; cellulosome protein dockerin type I; KEGG: cth:Cthe_0624 glycoside hydrolase family protein.
  
  
 0.713
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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