Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_0941Xylose isomerase domain protein TIM barrel; Involved in the biosynthesis of D-psicose. Catalyzes the reversible epimerization of D-fructose at the C3 position to yield D- psicose. The enzyme is highly specific for D-psicose and shows very low activity with D-tagatose. (293 aa)    
Predicted Functional Partners:
Ccel_0942
KEGG: cpy:Cphy_3243 hypothetical protein.
       0.671
Ccel_1033
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
  
 0.562
Ccel_0943
PFAM: FAD dependent oxidoreductase; KEGG: rle:RL3853 putative protein involved in invasion.
       0.526
tpiA
Phosphoglycerate kinase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.484
Ccel_0500
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cth:Cthe_0234 AMP-dependent synthetase and ligase.
  
   
 0.436
Ccel_2331
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: bsu:BSU17180 polyketide synthase of type I.
  
  
 0.432
Ccel_0877
PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_1170 major facilitator transporter.
 
  
 0.428
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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