Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_0970PFAM: Nucleotidyl transferase; KEGG: dol:Dole_0521 nucleotidyl transferase. (244 aa)    
Predicted Functional Partners:
Ccel_0969
PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: dol:Dole_0520 NAD-dependent epimerase/dehydratase.
 
  
 0.959
Ccel_0971
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mja:MJ0211 UDP-glucose 4-epimerase (GalE).
 
  
 0.861
Ccel_1091
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cac:CAC2332 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.848
Ccel_0348
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: cth:Cthe_1961 nucleotidyl transferase.
 
  
0.708
Ccel_1940
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: cth:Cthe_1079 nucleotidyl transferase.
  
  
 0.670
Ccel_1817
PFAM: polysaccharide biosynthesis protein; KEGG: mmz:MmarC7_1361 polysaccharide biosynthesis protein.
  
  
 0.665
Ccel_2616
PFAM: acyltransferase 3; KEGG: sgo:SGO_2012 transmembrane protein.
  
  
 0.665
Ccel_2883
PFAM: glycosyl transferase group 1; polysaccharide pyruvyl transferase; KEGG: cth:Cthe_2702 polysaccharide pyruvyl transferase.
  
  
 0.554
Ccel_1816
PFAM: glycosyl transferase family 2; KEGG: sgr:SGR_2292 putative sugar transferase.
 
  
 0.544
Ccel_1773
PFAM: glycosyl transferase group 1; KEGG: cth:Cthe_1303 glycosyl transferase, group 1.
 
  
 0.535
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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