Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_0987KEGG: hau:Haur_3969 hypothetical protein. (79 aa)    
Predicted Functional Partners:
Ccel_0989
FkbH like protein; TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; KEGG: npu:Npun_R3439 FkbH like protein.
 
     0.899
Ccel_2304
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: aoe:Clos_0989 NADH dehydrogenase (quinone).
   
 0.842
Ccel_0854
PfaD family protein; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PfaD family protein; PFAM: 2-nitropropane dioxygenase NPD; Acyl transferase; KEGG: gur:Gura_3105 malonyl CoA-acyl carrier protein transacylase.
 
 0.833
Ccel_2331
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: bsu:BSU17180 polyketide synthase of type I.
 
 
 0.833
Ccel_1607
Electron transfer flavoprotein alpha subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: cno:NT01CX_1204 electron transfer flavoprotein, alpha subunit.
  
 0.806
Ccel_0986
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: npu:Npun_R3442 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
   
 0.802
Ccel_0988
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: npu:Npun_R3440 acyl-CoA dehydrogenase domain-containing protein.
 
  
 0.788
Ccel_0974
PFAM: AMP-dependent synthetase and ligase; condensation domain protein; cobalamin B12-binding domain protein; phosphopantetheine-binding; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bwe:BcerKBAB4_1784 amino acid adenylation domain-containing protein.
 
    0.787
Ccel_1089
FkbH like protein; TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; KEGG: npu:Npun_R3439 FkbH like protein.
 
     0.785
Ccel_0977
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Non-ribosomal peptide synthetase; Beta-ketoacyl synthase; KEGG: cyt:cce_3073 peptide synthetase.
 
  
 0.759
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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