Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_0989FkbH like protein; TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; KEGG: npu:Npun_R3439 FkbH like protein. (350 aa)    
Predicted Functional Partners:
Ccel_0987
KEGG: hau:Haur_3969 hypothetical protein.
 
     0.899
Ccel_0988
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: npu:Npun_R3440 acyl-CoA dehydrogenase domain-containing protein.
 
   
 0.673
Ccel_0986
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: npu:Npun_R3442 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
   
 0.646
Ccel_0976
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: ckl:CKL_2355 hybrid nonribosomal peptide synthetase/polyketide synthase.
     0.605
Ccel_0977
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Non-ribosomal peptide synthetase; Beta-ketoacyl synthase; KEGG: cyt:cce_3073 peptide synthetase.
 
     0.604
Ccel_0974
PFAM: AMP-dependent synthetase and ligase; condensation domain protein; cobalamin B12-binding domain protein; phosphopantetheine-binding; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bwe:BcerKBAB4_1784 amino acid adenylation domain-containing protein.
 
     0.600
Ccel_0982
TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: ava:Ava_4099 non-ribosomal peptide synthase.
 
     0.584
Ccel_2326
PFAM: phosphopantetheine-binding; KEGG: mar:MAE_56580 peptide synthetase.
 
     0.565
Ccel_0978
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: amr:AM1_A0228 beta-ketoacyl synthase, putative.
 
     0.556
Ccel_2384
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: ckl:CKL_1733 hybrid nonribosomal peptide synthetase/polyketide synthase.
 
     0.555
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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