Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_0992PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 2 sugar binding; KEGG: bth:BT_4151 beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (1056 aa)    
Predicted Functional Partners:
Ccel_1020
KEGG: cpy:Cphy_0874 hypothetical protein.
  
   
 0.630
Ccel_1241
Carbohydrate binding family 6; PFAM: coagulation factor 5/8 type domain protein; cellulosome protein dockerin type I; Carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: fjo:Fjoh_4083 hypothetical protein.
  
     0.621
Ccel_0991
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: csc:Csac_1725 AraC family transcriptional regulator.
 
     0.614
Ccel_1013
PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: pin:Ping_2019 beta-D-galactosidase.
  
     0.565
Ccel_3003
Glycosidase PH1107-related; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.
 
    0.554
Ccel_3001
PFAM: glycosidase PH1107-related; KEGG: tpt:Tpet_1543 glycosidase, PH1107-related.
 
    0.532
Ccel_1262
PFAM: protein of unknown function DUF303 acetylesterase putative; glycoside hydrolase family 2 sugar binding; KEGG: csc:Csac_0206 protein of unknown function DUF303, acetylesterase putative; Belongs to the glycosyl hydrolase 2 family.
  
     0.512
Ccel_3002
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
 
     0.502
Ccel_1233
Carbohydrate binding family 6; PFAM: cellulosome protein dockerin type I; Carbohydrate binding family 6; glycoside hydrolase family 43; SMART: cellulose binding type IV; KEGG: bfs:BF0575 putative glycosyl hydrolase/xylanase.
 
     0.483
Ccel_1004
PFAM: glycoside hydrolase family 31; KEGG: bvu:BVU_0491 alpha-glycosidase; Belongs to the glycosyl hydrolase 31 family.
 
   
 0.457
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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