Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_1029PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cbl:CLK_2861 putative L-iditol 2-dehydrogenase. (356 aa)    
Predicted Functional Partners:
Ccel_0954
PFAM: PfkB domain protein; KEGG: tpd:Teth39_0632 ribokinase-like domain-containing protein.
  
 
 0.907
Ccel_3221
PFAM: hexokinase; KEGG: hmo:HM1_0763 hexokinase, putative.
   
 
 0.906
xylA
TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cdf:CD3064 xylose isomerase; Belongs to the xylose isomerase family.
     
 0.903
Ccel_1030
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pac:PPA0918 putative zinc-binding sorbitol dehydrogenase.
 
    
0.816
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
    0.753
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
 0.657
Ccel_1026
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_4679 binding-protein-dependent transport systems inner membrane component.
       0.632
Ccel_1027
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_4678 binding-protein-dependent transport systems inner membrane component.
       0.632
Ccel_1032
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dth:DICTH_1536 oxidoreductase, short chain dehydrogenase/reductase family.
 
    0.621
Ccel_1034
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein; KEGG: afl:Aflv_2782 transcriptional regulator of deoxyribonucleoside metabolism.
 
   
 0.524
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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