Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_1083PFAM: iron-containing alcohol dehydrogenase; KEGG: cbt:CLH_3242 NADPH-dependent butanol dehydrogenase. (381 aa)    
Predicted Functional Partners:
Ccel_1080
PFAM: PfkB domain protein; KEGG: cbt:CLH_3246 kinase, PfkB family.
 
 
 
 0.761
Ccel_1079
PFAM: isochorismatase hydrolase; KEGG: cbt:CLH_3247 isochorismatase family protein.
 
   
 0.751
Ccel_1082
PFAM: photosystem I assembly BtpA; KEGG: cbt:CLH_3243 hypothetical protein.
 
     0.743
Ccel_1081
PFAM: purine or other phosphorylase family 1; KEGG: cbt:CLH_3244 uridine phosphorylase.
   
   0.726
Ccel_1078
PFAM: inner-membrane translocator; KEGG: cbt:CLH_3248 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.674
Ccel_1077
PFAM: inner-membrane translocator; KEGG: cbt:CLH_3249 sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.651
Ccel_1076
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbt:CLH_3250 ribose import ATP-binding protein RbsA.
     
 0.646
Ccel_1164
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: cdf:CD2682 pyruvate-flavodoxin oxidoreductase.
  
  
 0.639
Ccel_0016
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: cpy:Cphy_3558 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
  
 0.635
Ccel_1075
PFAM: basic membrane lipoprotein; KEGG: cbt:CLH_3251 putative basic membrane lipoprotein.
       0.544
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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