Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_1177PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cpy:Cphy_1057 ABC transporter related. (298 aa)    
Predicted Functional Partners:
Ccel_1178
ABC-type Na+ efflux pump permease component-like protein; KEGG: bcy:Bcer98_3209 sodium export permease protein.
 
  
 0.982
Ccel_1151
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbl:CLK_0187 ABC transporter, ATP-binding protein.
 
    
0.803
ecfA-2
ABC transporter related; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.773
Ccel_1175
PFAM: transcriptional regulator PadR family protein; KEGG: lmo:lmo1213 hypothetical protein.
 
     0.758
Ccel_1176
KEGG: cdf:CD1088 hypothetical protein.
 
     0.735
Ccel_1269
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
    
0.714
ecfA
ABC transporter related; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.627
Ccel_1184
Cobalt ABC transporter, ATPase subunit; KEGG: cth:Cthe_1801 ABC transporter related protein; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase.
    
0.494
Ccel_1174
PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: pmy:Pmen_1038 metallophosphoesterase; Belongs to the 5'-nucleotidase family.
       0.484
Ccel_1180
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1191 ABC transporter, ATP-binding protein.
 
    
0.474
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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