Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mtnATranslation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). (364 aa)    
Predicted Functional Partners:
mtnK
5-methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.
 
 0.999
Ccel_1290
PFAM: class II aldolase/adducin family protein; KEGG: cpy:Cphy_1177 class II aldolase/adducin family protein.
 
  
 0.964
Ccel_0607
PFAM: protein of unknown function DUF152; KEGG: cth:Cthe_0911 hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
    
  0.902
Ccel_2474
PFAM: methylenetetrahydrofolate reductase; homocysteine S-methyltransferase; KEGG: ckl:CKL_1762 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein.
   
  
 0.788
Ccel_1537
PFAM: ribulose-phosphate 3-epimerase; KEGG: cth:Cthe_0576 ribulose-5-phosphate 3-epimerase.
  
   0.647
Ccel_1287
PFAM: aminotransferase class I and II; Allinase-like; KEGG: cbk:CLL_A2918 threonine-phosphate decarboxylase.
  
  
 0.580
Ccel_1291
Hypothetical protein.
       0.545
Ccel_3467
TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: cbt:CLH_3015 L-ribulose-5-phosphate 4-epimerase.
  
  
 0.535
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
    0.494
Ccel_1285
PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: cpy:Cphy_1382 precorrin-8X methylmutase CbiC/CobH.
  
    0.450
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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