Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene co-occurrence
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[Homology]
Score
Ccel_1302Putative transcriptional regulator, TetR family; KEGG: ckl:CKL_2387 transcriptional regulator. (180 aa)    
Predicted Functional Partners:
Ccel_1213
PFAM: condensation domain protein; Alcohol acetyltransferase; KEGG: mac:MA1194 hypothetical protein.
  
     0.620
Ccel_1217
PFAM: Alcohol acetyltransferase; KEGG: mac:MA1194 hypothetical protein.
  
     0.591
Ccel_3180
Putative transcriptional regulator, TetR family; KEGG: ctc:CTC01854 transcriptional regulator.
  
     0.586
Ccel_1210
KEGG: mac:MA1194 hypothetical protein.
  
     0.561
Ccel_1303
PFAM: Spore coat protein CotH; KEGG: mla:Mlab_1597 hypothetical protein.
       0.545
Ccel_1304
KEGG: mla:Mlab_1595 hypothetical protein.
       0.545
Ccel_0691
PFAM: Coat F domain protein; KEGG: cac:CAC1335 spore coat protein F (cotf) related protein.
  
     0.516
Ccel_1305
KEGG: cpf:CPF_1142 hypothetical protein.
  
    0.505
Ccel_1655
PFAM: cellulosome protein dockerin type I; KEGG: sus:Acid_0258 hypothetical protein.
  
   
 0.502
Ccel_0142
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; histidine kinase HAMP region domain protein; KEGG: cpy:Cphy_1915 AraC family transcriptional regulator.
  
     0.489
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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