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rplT protein (Clostridium cellulolyticum) - STRING interaction network
"rplT" - 50S ribosomal protein L20 in Clostridium cellulolyticum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
rplT50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (117 aa)    
Predicted Functional Partners:
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
   
 
  0.999
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (116 aa)
 
 
  0.999
rpmA
PFAM- ribosomal protein L27; KEGG- cth-Cthe_0162 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (93 aa)
   
 
  0.999
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (144 aa)
 
 
  0.999
rpsP
PFAM- ribosomal protein S16; KEGG- cth-Cthe_0769 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family (81 aa)
   
 
  0.999
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (208 aa)
 
 
  0.999
rpsI
PFAM- ribosomal protein S9; KEGG- cth-Cthe_1782 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (130 aa)
 
 
  0.999
rplQ
PFAM- ribosomal protein L17; KEGG- cth-Cthe_2933 50S ribosomal protein L17P (174 aa)
     
 
  0.999
rplV
50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome (158 aa)
   
 
  0.999
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (156 aa)
   
 
  0.999
Your Current Organism:
Clostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: C. cellulolyticum H10, Clostridium cellulolyticum, Clostridium cellulolyticum H10, Clostridium cellulolyticum str. H10, Clostridium cellulolyticum strain H10
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