Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_1464KEGG: cpy:Cphy_0207 hypothetical protein. (292 aa)    
Predicted Functional Partners:
Ccel_1465
PFAM: heat shock protein DnaJ domain protein; KEGG: cno:NT01CX_1376 molecular chaperone.
 
     0.945
Ccel_1466
KEGG: cno:NT01CX_1375 hypothetical protein.
 
     0.932
Ccel_1463
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cth:Cthe_1259 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.532
Ccel_1522
PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cth:Cthe_0559 single-strand DNA-binding protein.
  
     0.476
Ccel_1734
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cth:Cthe_0706 RpiR family transcriptional regulator.
  
     0.453
Ccel_2001
PFAM: Mg2 transporter protein CorA family protein; KEGG: mba:Mbar_A0156 transporter.
  
    0.443
Ccel_1467
KEGG: cth:Cthe_1017 hypothetical protein.
       0.429
Ccel_1326
KEGG: cth:Cthe_0165 hypothetical protein.
  
     0.411
Ccel_3106
KEGG: cbe:Cbei_4697 Zn-finger containing protein.
 
     0.403
Ccel_0196
KEGG: cdf:CD2104 putative ABC transporter, permease protein.
  
     0.401
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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