Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_1554KEGG: cpf:CPF_1618 OB-fold nucleic acid binding domain-containing protein. (377 aa)    
Predicted Functional Partners:
Ccel_1553
Hypothetical protein; KEGG: cau:Caur_2780 endonuclease/exonuclease/phosphatase.
    
 0.941
Ccel_1555
PFAM: phosphoesterase PA-phosphatase related; KEGG: tpd:Teth39_0213 phosphoesterase, PA-phosphatase related.
  
  
 0.664
Ccel_0546
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cbe:Cbei_0065 ferredoxin.
  
     0.572
Ccel_1144
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SirA family protein; Rhodanese domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: afl:Aflv_0303 multidomain redox protein (NAD(FAD)-dependent oxidoreductase; rhodanese domain; SirA-like redox domain; peroxiredoxin domain); Belongs to the sulfur carrier protein TusA family.
  
  
 0.494
Ccel_1552
PFAM: protein of unknown function DUF1232; KEGG: cpy:Cphy_3605 hypothetical protein.
       0.459
Ccel_1942
PFAM: copper amine oxidase domain protein; KEGG: cpf:CPF_2611 hypothetical protein.
  
 
   0.419
azoR
NAD(P)H dehydrogenase (quinone); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
  
     0.407
Ccel_1387
KEGG: lsp:Bsph_2991 hypothetical protein.
  
     0.406
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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