Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_1656Carbohydrate binding family 6; PFAM: cellulosome protein dockerin type I; Carbohydrate binding family 6; SMART: cellulose binding type IV; Parallel beta-helix repeat; KEGG: cth:Cthe_2195 carbohydrate-binding family 6 protein. (951 aa)    
Predicted Functional Partners:
Ccel_2392
PFAM: glycoside hydrolase family 9; cellulosome protein dockerin type I; Carbohydrate-binding CenC domain protein; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: cac:CAC0561 cellulase CelE-like protein.
 
 
 
 0.727
Ccel_2243
PFAM: Pectate lyase/Amb allergen; cellulosome protein dockerin type I; KEGG: cth:Cthe_2179 pectate lyase/Amb allergen.
  
   
 0.713
Ccel_0740
PFAM: glycoside hydrolase family 5; cellulosome protein dockerin type I; KEGG: cth:Cthe_2872 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
   
 0.664
Ccel_0881
KEGG: cth:Cthe_2805 carbohydrate-binding, CenC-like protein.
  
     0.660
Ccel_2530
PFAM: Ricin B lectin; cellulosome protein dockerin type I; KEGG: scl:sce5172 putative secreted protein.
  
     0.657
man26A
PFAM: glycoside hydrolase family 26; cellulosome protein dockerin type I; KEGG: cth:Cthe_2811 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 26 family.
  
   
 0.641
celCCA
Glycoside hydrolase family 5; The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: (1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the disaccharide cellobiose from the non-reducing end of the cellulose polymer chain; (3) Beta-1,4-glucosidases which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose.
  
   
 0.584
Ccel_3463
Carbohydrate-binding family 9; PFAM: Ig domain protein group 2 domain protein; Carbohydrate-binding family 9; KEGG: cth:Cthe_0912 glycoside hydrolase family protein.
 
   0.583
Ccel_1236
Protein of unknown function DUF1680; PFAM: cellulosome protein dockerin type I; Carbohydrate-binding CenC domain protein; protein of unknown function DUF1680; SMART: beta and gamma crystallin; KEGG: sus:Acid_1242 hypothetical protein.
 
     0.581
Ccel_2669
PFAM: Carbohydrate-binding family 9; KEGG: cth:Cthe_0912 glycoside hydrolase family protein.
 
   0.581
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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