STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccel_1686PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rci:RCIX2382 hydrogenase, small subunit-like protein (HycG-like). (266 aa)    
Predicted Functional Partners:
Ccel_1687
PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rci:RCIX2383 hydrogenase, large subunit-like protein (HycE-like).
 
 0.999
Ccel_1690
KEGG: rpd:RPD_3854 respiratory-chain NADH dehydrogenase, subunit 1.
 
 
 0.997
Ccel_1688
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rci:RCIX2384 hydrogenase, membrane subunit 1-like protein (EchA-like).
 
 
 0.996
Ccel_3367
PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: csc:Csac_1538 NADH-ubiquinone oxidoreductase, chain 49kDa; Belongs to the complex I 49 kDa subunit family.
 
 0.995
Ccel_3370
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: csc:Csac_1535 respiratory-chain NADH dehydrogenase, subunit 1.
 
 
 0.994
Ccel_1691
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rci:RCIX2387 hydrogenase, membrane subunit 4-like protein (HycC-like).
 
 
 0.993
Ccel_2304
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: aoe:Clos_0989 NADH dehydrogenase (quinone).
  
 0.985
Ccel_1164
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: cdf:CD2682 pyruvate-flavodoxin oxidoreductase.
  
 
 0.980
Ccel_3371
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvl:Dvul_2501 NADH dehydrogenase (quinone).
 
 
 0.976
Ccel_1689
KEGG: rci:RCIX2385 hydrogenase, membrane subunit 2-like protein.
 
  
 0.968
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.