Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_1768PFAM: extracellular solute-binding protein family 5; KEGG: tpd:Teth39_0202 extracellular solute-binding protein. (579 aa)    
Predicted Functional Partners:
Ccel_1766
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpr:CPR_2256 oligopeptide ABC transporter, permease component.
 
 0.996
Ccel_1767
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC0177 oligopeptide transport permease protein.
 
 0.996
Ccel_1764
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: tte:TTE2526 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.991
Ccel_1765
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: tte:TTE2525 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.991
Ccel_0048
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cth:Cthe_2965 binding-protein-dependent transport systems inner membrane component.
 
 
 0.956
Ccel_0047
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cth:Cthe_2964 binding-protein-dependent transport systems inner membrane component.
 
 
 0.930
Ccel_0608
PFAM: extracellular solute-binding protein family 5; KEGG: cth:Cthe_0910 extracellular solute-binding protein.
  
  
 
0.929
Ccel_0045
KEGG: cth:Cthe_2962 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase.
 
 
 0.810
Ccel_0046
KEGG: cth:Cthe_2963 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase.
 
 
 0.810
Ccel_0016
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: cpy:Cphy_3558 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
  
 0.809
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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