Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ccel_1937PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_0243 copper amine oxidase-like protein. (647 aa)    
Predicted Functional Partners:
Ccel_0390
Hypothetical protein; KEGG: csc:Csac_0946 TPR repeat-containing protein.
  
 
 
 0.798
Ccel_2442
PFAM: cellulosome protein dockerin type I; KEGG: gvi:gll3705 unknown protein.
  
  
 0.788
Ccel_1396
KEGG: ote:Oter_1909 hypothetical protein.
  
    0.781
Ccel_0728
PFAM: type 3a cellulose-binding domain protein; cellulosome anchoring protein cohesin region; protein of unknown function DUF291; KEGG: cth:Cthe_3077 cellulosome anchoring protein, cohesin region.
  
  
 0.777
Ccel_1491
PFAM: type 3a cellulose-binding domain protein; Hyalin; KEGG: LOC587453; similar to hyalin.
  
  
 0.777
Ccel_1515
Hypothetical protein; KEGG: bba:Bd2582 cell wall surface anchor family protein.
  
   
 0.777
Ccel_1517
KEGG: sfu:Sfum_1625 hypothetical protein.
  
   
 0.777
Ccel_1519
KEGG: predicted protein.
  
   
 0.777
Ccel_2515
KEGG: plu:plu2412 hypothetical protein.
  
   
 0.777
Ccel_2502
KEGG: cbe:Cbei_0745 hypothetical protein.
  
     0.772
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.