Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ccel_2214KEGG: cth:Cthe_0359 hypothetical protein. (122 aa)    
Predicted Functional Partners:
Ccel_1692
PFAM: Peptidoglycan-binding LysM; KEGG: cth:Cthe_0772 peptidoglycan-binding LysM.
  
     0.597
Ccel_2045
PFAM: flagellar hook-length control protein; KEGG: cth:Cthe_0471 flagellar hook-length control protein.
  
     0.558
Ccel_2085
KEGG: cth:Cthe_3174 hypothetical protein.
  
     0.500
Ccel_2928
KEGG: cth:Cthe_2695 hypothetical protein.
  
     0.494
Ccel_0592
PFAM: regulatory protein MerR; KEGG: cth:Cthe_0804 MerR family transcriptional regulator.
  
     0.487
Ccel_2215
TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; KEGG: cth:Cthe_0357 alpha-glucan phosphorylases.
       0.476
Ccel_0955
PFAM: Accessory gene regulator B; KEGG: cth:Cthe_2358 accessory gene regulator B.
  
     0.474
Ccel_1911
KEGG: cth:Cthe_0840 hypothetical protein.
  
     0.472
Ccel_0362
PFAM: cytochrome b5; KEGG: cth:Cthe_1942 hypothetical protein.
  
     0.456
Ccel_2213
KEGG: ckl:CKL_2815 hypothetical protein.
       0.453
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.