Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ccel_2228PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: bce:BC1813 carboxylic ester hydrolase. (406 aa)    
Predicted Functional Partners:
Ccel_2227
PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: bce:BC1813 carboxylic ester hydrolase.
 
    
0.690
Ccel_0672
PFAM: Thioesterase; KEGG: bcz:BCZK1713 thioesterase.
  
     0.492
Ccel_2229
KEGG: cbe:Cbei_4038 hypothetical protein.
       0.490
Ccel_2512
PFAM: Thioesterase; KEGG: bcz:BCZK1713 thioesterase.
  
     0.490
Ccel_2327
TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyltransferase 28 domain; KEGG: cbe:Cbei_1729 glycosyltransferase, MGT family.
  
    0.469
Ccel_2395
PFAM: lipolytic protein G-D-S-L family; cellulosome protein dockerin type I; KEGG: gvi:gll2764 unknown protein.
  
   
 0.469
Ccel_2383
PFAM: condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: ckl:CKL_1731 polyketide synthase.
  
    0.465
Ccel_2659
PFAM: beta-lactamase; KEGG: cbl:CLK_3450 putative beta-lactamase.
  
     0.461
Ccel_2377
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: ckl:CKL_1731 polyketide synthase.
 
     0.457
Ccel_0862
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: gur:Gura_3095 beta-ketoacyl synthase.
  
     0.454
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.