STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccel_2229KEGG: cbe:Cbei_4038 hypothetical protein. (426 aa)    
Predicted Functional Partners:
Ccel_2230
KEGG: cpy:Cphy_0280 hypothetical protein.
 
   
 0.947
Ccel_2671
KEGG: dsy:DSY0048 hypothetical protein.
  
     0.723
Ccel_3235
KEGG: dsy:DSY4338 hypothetical protein.
  
     0.574
Ccel_2228
PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: bce:BC1813 carboxylic ester hydrolase.
       0.490
Ccel_1050
KEGG: cdf:CD0455 hypothetical protein.
  
     0.475
Ccel_2872
KEGG: cno:NT01CX_1826 hypothetical protein.
  
     0.457
Ccel_2418
KEGG: cdf:CD0277 hypothetical protein.
  
     0.450
Ccel_0319
KEGG: cbo:CBO0408 hypothetical protein.
  
     0.448
Ccel_2227
PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: bce:BC1813 carboxylic ester hydrolase.
       0.437
Ccel_2504
KEGG: cbo:CBO0408 hypothetical protein.
  
     0.426
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.