Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_2310PFAM: CheB methylesterase; KEGG: ckl:CKL_0573 CheB1. (216 aa)    
Predicted Functional Partners:
Ccel_2027
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cth:Cthe_0490 CheA signal transduction histidine kinases.
 
 0.997
Ccel_2315
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: cbe:Cbei_4829 CheA signal transduction histidine kinase.
 
 0.997
Ccel_1727
PFAM: MCP methyltransferase CheR-type; KEGG: cth:Cthe_0717 MCP methyltransferase, CheR-type.
  
 0.994
Ccel_2038
CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: cth:Cthe_0478 flagellar motor switch protein.
  
  
 0.972
Ccel_0588
PFAM: CheW domain protein; KEGG: cth:Cthe_0878 CheW protein.
 
 
 0.969
Ccel_2026
PFAM: CheW domain protein; KEGG: cth:Cthe_0491 CheW protein.
 
 
 0.969
Ccel_2099
PFAM: CheW domain protein; KEGG: tpd:Teth39_1010 CheW protein.
 
 
 0.969
Ccel_2314
PFAM: CheW domain protein; KEGG: cbe:Cbei_4822 putative CheW protein.
 
 
 0.969
Ccel_0221
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: lsp:Bsph_4425 methyl-accepting chemotaxis protein McpA (H1).
 
 0.955
Ccel_0049
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY4790 hypothetical protein.
 
 0.937
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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