Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_2472PFAM: AMP-dependent synthetase and ligase; KEGG: cth:Cthe_1232 AMP-dependent synthetase and ligase. (570 aa)    
Predicted Functional Partners:
Ccel_2471
PFAM: inositol monophosphatase; KEGG: nis:NIS_1712 inositol-phosphate phosphatase.
       0.781
Ccel_3252
PFAM: AMP-dependent synthetase and ligase; KEGG: hmo:HM1_0197 long-chain-fatty-acid-CoA ligase.
 
 
0.729
Ccel_1626
PFAM: AMP-dependent synthetase and ligase; KEGG: vpa:VP2425 putative long-chain-fatty-acid-CoA ligase.
  
  
 
0.720
Ccel_0896
PFAM: AMP-dependent synthetase and ligase; KEGG: cth:Cthe_1232 AMP-dependent synthetase and ligase.
  
  
 
0.632
Ccel_2470
Hypothetical protein.
       0.618
Ccel_1369
PFAM: AMP-dependent synthetase and ligase; KEGG: cth:Cthe_1232 AMP-dependent synthetase and ligase.
  
  
 
0.617
Ccel_2331
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: bsu:BSU17180 polyketide synthase of type I.
  
 
 0.559
Ccel_2474
PFAM: methylenetetrahydrofolate reductase; homocysteine S-methyltransferase; KEGG: ckl:CKL_1762 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein.
  
  
 0.553
Ccel_2473
PFAM: dihydropteroate synthase DHPS; KEGG: mta:Moth_1207 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase.
  
    0.531
Ccel_2378
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: bld:BLi00401 lichenysin synthetase A.
     
 0.520
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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