Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_2641Signal transduction histidine kinase regulating citrate/malate metabolism; KEGG: dsy:DSY1956 hypothetical protein. (423 aa)    
Predicted Functional Partners:
Ccel_2642
SMART: Ig domain protein group 2 domain protein; KEGG: dsy:DSY1958 hypothetical protein.
 
     0.837
Ccel_2646
Two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: dsy:DSY1957 hypothetical protein.
 
  
 0.558
Ccel_2644
TIGRFAM: cell wall/surface repeat protein; PFAM: S-layer domain protein; Listeria/Bacterioides repeat protein; KEGG: lin:lin2724 internalin-like protein.
  
     0.492
Ccel_1095
KEGG: bcs:BCAN_A0517 hypothetical protein.
  
     0.468
Ccel_1121
KEGG: cac:CAC1520 hypothetical protein.
  
     0.437
Ccel_2341
KEGG: cbf:CLI_2416 hypothetical protein.
  
     0.435
Ccel_3019
PFAM: S-layer domain protein; KEGG: swo:Swol_0298 hypothetical protein.
  
     0.422
Ccel_0847
KEGG: dsy:DSY0716 hypothetical protein.
  
     0.411
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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