Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_2808PFAM: DNA polymerase beta domain protein region; KEGG: ckl:CKL_2614 streptomycin 3''-adenylyltransferase. (272 aa)    
Predicted Functional Partners:
Ccel_2811
PFAM: DNA polymerase beta domain protein region; KEGG: ckl:CKL_2617 hypothetical protein.
 
     0.864
Ccel_2810
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ckl:CKL_2616 methyltransferase.
 
     0.822
Ccel_2809
PFAM: GCN5-related N-acetyltransferase; protein of unknown function UPF0157; KEGG: ckl:CKL_2615 hypothetical protein.
 
   
 0.668
Ccel_3297
KEGG: cpf:CPF_0949 putative phage terminase, large subunit.
  
     0.576
Ccel_3050
KEGG: cpf:CPF_0949 putative phage terminase, large subunit.
  
     0.575
Ccel_3038
KEGG: cpf:CPF_0962 hypothetical protein.
  
     0.550
Ccel_3285
KEGG: cpf:CPF_0962 hypothetical protein.
  
     0.550
Ccel_2812
KEGG: dde:Dde_0890 hypothetical protein.
       0.465
Ccel_3048
Hypothetical protein; KEGG: cpf:CPF_0952 putative phage minor capsid protein.
  
     0.454
Ccel_3295
Hypothetical protein; KEGG: cpf:CPF_0952 putative phage minor capsid protein.
  
     0.451
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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