Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_2810Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ckl:CKL_2616 methyltransferase. (246 aa)    
Predicted Functional Partners:
Ccel_2811
PFAM: DNA polymerase beta domain protein region; KEGG: ckl:CKL_2617 hypothetical protein.
 
     0.924
Ccel_2808
PFAM: DNA polymerase beta domain protein region; KEGG: ckl:CKL_2614 streptomycin 3''-adenylyltransferase.
 
     0.822
Ccel_2812
KEGG: dde:Dde_0890 hypothetical protein.
       0.741
Ccel_2809
PFAM: GCN5-related N-acetyltransferase; protein of unknown function UPF0157; KEGG: ckl:CKL_2615 hypothetical protein.
 
   
 0.726
Ccel_2813
KEGG: amt:Amet_3967 hypothetical protein.
       0.638
Ccel_1526
PFAM: Polyprenyl synthetase; KEGG: cth:Cthe_0564 trans-hexaprenyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
 
 0.568
Ccel_2331
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: bsu:BSU17180 polyketide synthase of type I.
   
 
 0.502
Ccel_3048
Hypothetical protein; KEGG: cpf:CPF_0952 putative phage minor capsid protein.
  
     0.484
Ccel_3295
Hypothetical protein; KEGG: cpf:CPF_0952 putative phage minor capsid protein.
  
     0.479
Ccel_2378
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; KEGG: bld:BLi00401 lichenysin synthetase A.
     
 0.466
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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