Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ccel_2883PFAM: glycosyl transferase group 1; polysaccharide pyruvyl transferase; KEGG: cth:Cthe_2702 polysaccharide pyruvyl transferase. (745 aa)    
Predicted Functional Partners:
Ccel_0262
PFAM: glycosyl transferase family 4; UDP-N-acetylglucosamine 2-epimerase; KEGG: cth:Cthe_2601 UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.898
Ccel_2921
Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
 
 0.876
Ccel_2515
KEGG: plu:plu2412 hypothetical protein.
  
  
 0.754
Ccel_0278
PFAM: S-layer domain protein; KEGG: cth:Cthe_2613 S-layer-like domain-containing protein.
  
   
 0.750
Ccel_1817
PFAM: polysaccharide biosynthesis protein; KEGG: mmz:MmarC7_1361 polysaccharide biosynthesis protein.
  
  
 0.745
Ccel_2616
PFAM: acyltransferase 3; KEGG: sgo:SGO_2012 transmembrane protein.
  
  
 0.745
Ccel_2393
PFAM: S-layer domain protein; KEGG: btk:BT9727_0789 S-layer protein.
  
   
 0.729
Ccel_2933
PFAM: O-antigen polymerase; KEGG: csc:Csac_2364 O-antigen polymerase.
 
  
 0.714
Ccel_2931
KEGG: pth:PTH_2771 hypothetical protein.
 
     0.709
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.707
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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