STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccel_3137Hypothetical protein. (294 aa)    
Predicted Functional Partners:
Ccel_3138
Hypothetical protein.
       0.746
Ccel_3139
Hypothetical protein; KEGG: drm:Dred_0825 type II secretion system protein E.
       0.737
Ccel_3140
Hypothetical protein; KEGG: maq:Maqu_2336 septum site-determining protein MinD.
       0.737
Ccel_3141
Hypothetical protein.
       0.721
Ccel_3142
KEGG: csc:Csac_2637 hypothetical protein.
       0.711
Ccel_3143
KEGG: aoe:Clos_1909 hypothetical protein.
       0.711
Ccel_3144
Hypothetical protein.
       0.711
Ccel_3145
KEGG: aoe:Clos_1910 hypothetical protein.
       0.696
Ccel_3146
KEGG: aoe:Clos_1911 hypothetical protein.
       0.603
Ccel_3147
KEGG: csc:Csac_2619 hypothetical protein.
       0.603
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.